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This project uses genomic techniques to develop microbial processes to transform, reuse, recycle and remediate by-products and contaminants from industrial and agricultural processes.
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This project uses genomic techniques to develop microbial processes to transform, reuse, recycle and remediate by-products and contaminants from industrial and agricultural processes.
EXPLORE >   Projects >  BEEM: Bioproducts and Enzymes from Environmental Metagenomes
BEEM: Bioproducts and Enzymes from Environmental Metagenomes
OBJECTIVES
TEAM
APPROACH
IMPACT
INTELLECTUAL PROPERTY
Objectives

BEEM: Bioproducts and Enzymes from Environmental Metagenomes is a 4-year Genome Canada and Ontario Research Fund-sponsored project led by Professor Elizabeth Edwards of the University of Toronto and Dr. David Major of Geosyntec Consultants.  BEEM research uses genomic strategies to identify and harness naturally occurring microbes that can transform low-value co-products, feedstock residues and wastes into high-value bioproducts, or can degrade common environmental pollutants to decontaminate land and water.

Our international team of chemical engineers, biologists, policy experts and industrial partners has an extensive academic research record and real-world experience in designing and commercializing environmentally sound bioprocesses, and consulting on their associated public policies.  Our objective is to develop measures, both scientific and policy-based, to anticipate, avoid and remediate the environmental impacts of a bioeconomy.  New industrial partners are welcomed; please visit www.beem.utoronto.ca or send an inquiry to info.beem@utoronto.ca.

Project Information
Website
Started: 2009
Ended: 2013

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Team

The BEEM project is centred at the University of Toronto and Dalhousie University, with international collaborators in Europe and the United States.  Funding is provided by Genome Canada and the Ontario Research Fund, and the project receives additional support from private and public organizations, including industry partners such as SiREM and Tembec Inc.  The project is led by Elizabeth Edwards of the University of Toronto and David Major of Geosyntec Consultants Inc.

Collaborator Role In Project Organization Country
Robert Beiko
Co-Investigator
Dalhousie University
Canada
Malcolm Campbell
Co-Investigator
University of Toronto (UofT)
Canada
Peter Golyshin
Co-Investigator
Bangor University
United Kingdom
Frank Loeffler
Co-Investigator
University of Tennessee
United States
Heather MacLean
Co-Investigator
University of Toronto (UofT)
Canada
Radhakrishnan Mahadevan
Co-Investigator
University of Toronto (UofT)
Canada
Emma Master
Co-Investigator
University of Toronto (UofT)
Canada
Charles Mims
Co-Investigator
University of Toronto (UofT)
Canada
Doug Reeve
Co-Investigator
University of Toronto (UofT)
Canada
Alexei Savchenko
Co-Investigator
University of Toronto (UofT)
Canada
Bradley A. Saville
Co-Investigator
University of Toronto (UofT)
Canada
Elisabeth Tillier
Co-Investigator
University of Toronto (UofT)
Canada
Alexander Yakunin
Co-Investigator
University of Toronto (UofT)
Canada
Elizabeth Edwards
Project Leader
University of Toronto (UofT)
Canada
David Major
Project Leader
Geosyntec Consultants Inc.
Canada


Approach

The project’s goals will be accomplished by tapping into the vast reservoir of metabolic diversity found in the microbial world to find microbes with specific abilities to transform compounds of interest. We are establishing a high throughput “pipeline” from environmental sample to product, beginning with samples from unique environments that are rich in uncharacterized microbes, through enrichment of microbial activity, metagenome sequencing, metabolic enzyme and pathway discovery, computational modeling and optimization of enzymatic transformation reactions to final bioremediation and biotransformation applications.

Project Information


Impact

Achievements to date include enriching several anaerobic consortia with novel waste degradation abilities, structural and functional characterization of dehalogenases and marine oil-degrading enzymes, modeling uranium bioremediation at a contaminated site, and performing a life cycle assessment/costing for anaerobic digestion.

Project Information


Intellectual Property

Project Information
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CATEGORIES
Application Area
Bioproducts and biomaterials, Energy, Environment, Natural resources
Core Technology
Nucleic acids: DNA sequencing, Gene expression systems, Microarrays
Proteins: Crystallography and/or NMR, Enzymatic assays, Mass spectrometry, Protein expression and purification, Protein sequencing
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