RESEARCHERS
 
LOG IN
SIGN-UP
SEARCH
JUMP TO ADVANCED SEARCH
                                            
Alexei Savchenko research focuses on the understanding the structural determinants of protein function.
Welcome to the Genomics Sector Innovation Network (G-SIN) portal

Alexei Savchenko research focuses on the understanding the structural determinants of protein function.
EXPLORE >   Researchers >  Alexei Savchenko
Alexei Savchenko |
University of Toronto (UofT)
RESEARCH
BIOGRAPHY
KEY PUBLICATIONS
INTELLECTUAL PROPERTY
Research
Dr. Savchenko research is particularly studies the proteins that participate in bacterial adaptation to the changes in a chemical environment. His current research focuses on bacterial one-component systems, which regulate the transcription in response to the presence of different small molecules - effectors. His focus is on the structural and functional characterization of 'orphan' bacterial regulators and their effector binding domains. Dr. Savchenko and his lab have already cloned and purified over 50 potential transcriptional regulators and their EBDs from Escherichia coli, Pseudomonas aeruginosa, and Thermotoga maritima. The structures of six different IclR regulators and one GntR regulator have been determined so far. The purified regulators were also screened for binding against the library of 140 representatives of different classes of cellular metabolites. They have identified several potential effectors and characterized their effect on the activity of the corresponding regulators.
Researcher Information
Group Leader
IclR group and the Structural Proteomics group
Website
C.H. Best Institute
112 College St. Room 72
Toronto, Ontario
Canada M5G 1L6
Send a message
Log In to mark favourites


Biography
Dr. Savchenko received his Master’s of Science in Molecular Biology at Yerevan State University in Armenia in 1992. He then earned his PhD. in Microbiology and Biochemistry at the Université de Nantes.

From December 2000 Dr. Savchenko has been supervising a team of researchers at the newly created Ontario Centre for Structural Proteomics in Toronto, which concentrates on structural and functional studies of structurally uncharacterized protein families in microbial genomes.
Researcher Information
Group Leader
IclR group and the Structural Proteomics group
Website
C.H. Best Institute
112 College St. Room 72
Toronto, Ontario
Canada M5G 1L6


Key Publications
Clasquin MF, Melamud E, Singer A, Gooding JR, Xu X, Dong A, Cui H, Campagna SR, Savchenko A, Yakunin AF, Rabinowitz JD, Caudy AA.
Riboneogenesisin yeast.
Cell. 2011,145,6:969-80
Filippova EV, Chruszcz M, Cymborowski M, Gu J, Savchenko A, Edwards A, Minor W.
Crystal structure of a putative transcriptional regulator SCO0520 from Streptomyces coelicolor A3(2) reveals an unusual dimer among TetR family proteins.
J Struct Funct Genomics. 2011
Klimecka MM, Chruszcz M, Font J, Skarina T, Shumilin I, Onopryienko O, Porebski PJ, Cymborowski M, Zimmerman MD, Hasseman J, Glomski IJ, Lebioda L, Savchenko A, Edwards A, Minor W.
Structural Analysis of a Putative Aminoglycoside N-Acetyltransferase from Bacillus anthracis.
J Mol Biol. 2011,410,3:411-23.
Tchigvintsev A, Singer AU, Flick R, Petit P, Brown G, Evdokimova E, Savchenko A, Yakunin AF.
Structure and activity of the Saccharomyces cerevisiae dUTP pyrophosphatase DUT1, an essential housekeeping enzyme.
Biochem J. 2011,437,2:243-53.
Osipiuk J, Xu X, Cui H, Savchenko A, Edwards A, Joachimiak A.
Crystal structure of secretory protein Hcp3 from Pseudomonas aeruginosa.
J Struct Funct Genomics. 2011,12,1:21-6.
Researcher Information
Group Leader
IclR group and the Structural Proteomics group
Website
C.H. Best Institute
112 College St. Room 72
Toronto, Ontario
Canada M5G 1L6


Intellectual Property

YOU MAY ALSO BE INTERESTED IN:


CATEGORIES
Application Area
Human health, Instrumentation and tools
Disciplinary Focus
Informatics, theoretical biology and computer science, Mathematics and engineering
Research Paradigm
Large-scale projects
Core Technology
Proteins: Protein expression and purification, Protein sequencing, Protein-protein interaction assays
Sign-up to edit this profile
Events Jobs What is Genomics Genomics in Canada About Us Contact Us Privacy Policy Terms of Use Site-Map
© Ontario Genomics Institute, 2007-2013.